Traits & Carrier Status · Document 23 of 24
Bone Density
Variants associated with Sample Subject's bone-mineral-density baseline context, across the VDR, COL1A1, and LRP5 loci. All values below are synthetic and for demonstration only.
3 findings
1 Tier 2
2 Tier 3
Reviewed 2026-01-15
Provenance
Data Provenance
verified chain
- Document
- Bone Density
- Source assembly
- GRCh37 (hg19)
- Source file SHA-256
- 0000a1b2c3d4e5f6…4b5c6d7e
- Supersedes
- prior v1 · SHA 1111f0e9…
- Evidence sources
- PubMed, dbSNP, GWAS Catalog
- Access date
- 2026-01-15
Per-Gene Findings
Filter:
VDR — BsmI Site Heterozygous
Vitamin D receptor · bone-mineral-density marker
PubMedTier 2
rs1544410
12:48,239,835
GA
rs1544410 is G/A — the VDR BsmI site, heterozygous in this sample. This VDR intronic marker associates with bone-mineral-density variation in the cited literature.
Source: PubMed PMID 18348749 ↗ · dbSNP rs1544410 ↗
COL1A1 — Sp1 Site Heterozygous
Collagen type I alpha 1 · Sp1 binding site
dbSNPTier 3
rs1800012
17:48,278,415
GT
rs1800012 is G/T at the COL1A1 Sp1 site. This sample carries one copy of the T (Sp1 minor) allele. dbSNP records this variant's identifier and GRCh37 position.
Source: dbSNP rs1800012 ↗
LRP5 — A1330V Allele Present
LDL receptor-related protein 5 · bone-mass locus
GWAS CatalogTier 3
rs3736228
11:68,207,310
CT
rs3736228 is C/T — one copy of the LRP5 A1330V allele. The GWAS Catalog records bone-mineral-density associations at the LRP5 locus.
Source: GWAS Catalog LRP5 ↗
Genotype Table
| rsID | chr:pos | Genotype | Gene | Significance |
|---|---|---|---|---|
rs1544410 | 12:48,239,835 | GA | VDR | Tier 2 |
rs1800012 | 17:48,278,415 | GT | COL1A1 | Tier 3 |
rs3736228 | 11:68,207,310 | CT | LRP5 | Tier 3 |
Consult your prescribing clinician. This HelixlyAI report is a synthetic demonstration generated from a consumer DNA export. It is not a diagnosis, prescription, or substitute for professional medical advice. Do not start, stop, or change any treatment based on this document. Genotype is one of many factors influencing bone-mineral density.